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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01657COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00. (671 aa)    
Predicted Functional Partners:
CKO_01656
Hypothetical protein; KEGG: ece:Z0125 0.0037 aceF; pyruvate dehydrogenase (dihydrolipoyltransacetylase component) K00627; COG: COG1566 Multidrug resistance efflux pump; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.970
CKO_01655
Hypothetical protein; COG: NOG13888 non supervised orthologous group.
  
  
 0.859
CKO_01651
Hypothetical protein; COG: COG3895 Predicted periplasmic protein.
  
     0.767
CKO_00056
Hypothetical protein; KEGG: sty:STY4228 0.00075 4'-phosphopantetheinyl transferase K06133; COG: COG2091 Phosphopantetheinyl transferase.
  
     0.735
CKO_00223
Hypothetical protein; COG: COG0560 Phosphoserine phosphatase.
  
     0.708
CKO_00277
Hypothetical protein; KEGG: aha:AHA_1764 2.7e-12 ubiquitin ligase sinat5 K01932; COG: NOG17950 non supervised orthologous group.
  
     0.686
CKO_04644
Hypothetical protein; COG: NOG12178 non supervised orthologous group.
  
     0.662
CKO_01374
Hypothetical protein; COG: COG2128 Uncharacterized conserved protein.
  
    0.656
CKO_00252
Hypothetical protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.654
CKO_02049
Hypothetical protein; KEGG: ecp:ECP_1001 2.2e-200 glucose-1-phosphatase precursor K01085; COG: NOG06770 non supervised orthologous group; Psort location: Periplasmic, score:10.00.
  
     0.651
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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