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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01661Hypothetical protein; KEGG: bpm:BURPS1710b_A2293 1.5e-34 TetR-family regulatory protein K00356; COG: COG1309 Transcriptional regulator. (199 aa)    
Predicted Functional Partners:
CKO_01662
Hypothetical protein; KEGG: ecj:JW1642 1.6e-181 nemA; N-ethylmaleimide reductase, FMN-linked; COG: COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; Psort location: Cytoplasmic, score:8.96.
 
  
 0.784
CKO_01660
COG: COG3313 Predicted Fe-S protein.
       0.544
CKO_01663
Hypothetical protein; KEGG: ecp:ECP_1597 5.2e-64 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases.
     
 0.542
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 
 0.467
CKO_01659
Hypothetical protein; KEGG: ecc:c2039 2.7e-147 ydhF; hypothetical oxidoreductase YdhF; COG: COG4989 Predicted oxidoreductase; Psort location: Cytoplasmic, score:8.96.
       0.446
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 
 0.406
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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