close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01694Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (270 aa)    
Predicted Functional Partners:
CKO_01695
Hypothetical protein; KEGG: mag:amb2674 1.7e-08 cytochrome b subunit of formate dehydrogenase K00127; COG: COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); Psort location: CytoplasmicMembrane, score:10.00.
 
    0.955
CKO_01697
Hypothetical protein; COG: NOG06203 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
    0.953
CKO_01698
Hypothetical protein; KEGG: eci:UTI89_C1865 0. ydhV; hypothetical protein YdhV K03738; COG: COG2414 Aldehyde:ferredoxin oxidoreductase.
 
     0.930
CKO_01696
Hypothetical protein; KEGG: eci:UTI89_C1863 3.7e-118 putative oxidoreductase Fe-S subunit K00178; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1; Psort location: Cytoplasmic, score:9.97.
 
    0.850
CKO_01699
Hypothetical protein; KEGG: eci:UTI89_C1866 1.1e-107 ydhY; putative ferredoxin-like protein YdhY K00199; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1; Psort location: CytoplasmicMembrane, score:9.82.
 
    0.848
CKO_02181
Hypothetical protein; KEGG: pen:PSEEN2212 1.5e-185 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.826
CKO_00232
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
  
 
 
 0.797
CKO_01203
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
  
 
 
 0.790
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
 
 
 
 0.772
CKO_04304
Hypothetical protein; COG: COG3722 Transcriptional regulator.
  
     0.749
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.