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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01719Hypothetical protein; KEGG: pen:PSEEN4353 5.9e-63 metallo-beta-lactamase superfamily protein K01475; COG: COG0491 Zn-dependent hydrolases, including glyoxylases. (283 aa)    
Predicted Functional Partners:
CKO_01718
Hypothetical protein; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
 
    0.702
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.591
truA
Hypothetical protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.574
norW
Hypothetical protein; One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase.
   
 0.572
rsmH
Hypothetical protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
   
   0.544
CKO_00724
Hypothetical protein; KEGG: spt:SPA0749 1.2e-66 wzb; putative protein-tyrosine phosphatase K01104; COG: COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.537
CKO_02142
COG: COG3108 Uncharacterized protein conserved in bacteria.
  
    0.526
CKO_02820
Hypothetical protein; KEGG: cdi:DIP0495 3.8e-12 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG1178 ABC-type Fe3+ transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.468
CKO_04224
COG: COG4125 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.461
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.460
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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