Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKO_01732 | CKO_01733 | CKO_01732 | CKO_01733 | Hypothetical protein; COG: COG2200 FOG: EAL domain. | Hypothetical protein. | 0.497 |
CKO_01733 | CKO_01732 | CKO_01733 | CKO_01732 | Hypothetical protein. | Hypothetical protein; COG: COG2200 FOG: EAL domain. | 0.497 |
CKO_01733 | CKO_01734 | CKO_01733 | CKO_01734 | Hypothetical protein. | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.578 |
CKO_01733 | btuD | CKO_01733 | CKO_01735 | Hypothetical protein. | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | 0.429 |
CKO_01733 | btuE | CKO_01733 | CKO_01736 | Hypothetical protein. | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.429 |
CKO_01734 | CKO_01733 | CKO_01734 | CKO_01733 | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Hypothetical protein. | 0.578 |
CKO_01734 | btuD | CKO_01734 | CKO_01735 | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | 0.569 |
CKO_01734 | btuE | CKO_01734 | CKO_01736 | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.600 |
btuD | CKO_01733 | CKO_01735 | CKO_01733 | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.429 |
btuD | CKO_01734 | CKO_01735 | CKO_01734 | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.569 |
btuD | btuE | CKO_01735 | CKO_01736 | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.928 |
btuE | CKO_01733 | CKO_01736 | CKO_01733 | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Hypothetical protein. | 0.429 |
btuE | CKO_01734 | CKO_01736 | CKO_01734 | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Hypothetical protein; KEGG: eci:UTI89_C1901 1.5e-71 nlpC; probable lipoprotein NlpC precursor; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.600 |
btuE | btuD | CKO_01736 | CKO_01735 | Hypothetical protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | Hypothetical protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | 0.928 |