Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01751Hypothetical protein; COG: NOG07880 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46. (178 aa)    
Predicted Functional Partners:
CKO_04333
Hypothetical protein; COG: NOG06291 non supervised orthologous group.
  
     0.774
CKO_02000
Hypothetical protein; COG: NOG07875 non supervised orthologous group.
  
     0.773
CKO_01169
COG: COG3140 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0181 family.
  
     0.772
CKO_02034
Hypothetical protein; KEGG: vfi:VFA0083 2.8e-08 ynfI; anaerobic dimethyl sulfoxide reductase chain YnfI K00397; COG: COG3381 Uncharacterized component of anaerobic dehydrogenases.
  
     0.772
CKO_00355
Hypothetical protein; COG: NOG06776 non supervised orthologous group.
  
     0.771
CKO_02005
Hypothetical protein; COG: NOG14214 non supervised orthologous group.
  
     0.770
CKO_00315
Hypothetical protein; COG: NOG13899 non supervised orthologous group.
  
     0.769
CKO_01577
Hypothetical protein; COG: NOG11441 non supervised orthologous group; Belongs to the UPF0482 family.
  
     0.769
CKO_03245
Hypothetical protein; COG: NOG09835 non supervised orthologous group.
  
     0.769
CKO_04969
Hypothetical protein; KEGG: eci:UTI89_C4059 4.2e-236 yhjJ; protein YhjJ precursor K01412; COG: COG0612 Predicted Zn-dependent peptidases.
  
     0.769
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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