close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01760Hypothetical protein; KEGG: bce:BC3740 2.6e-07 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins. (280 aa)    
Predicted Functional Partners:
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
  
  
 0.874
CKO_01762
Hypothetical protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.856
CKO_01761
Hypothetical protein; KEGG: eci:UTI89_C1929 2.2e-49 celC; CelC subunit of N,N'-diacetylchitobiose PTS permease (previously designated CelABC, the cellobiose/arbutin/salicin PTS permease) K02759; COG: COG1447 Phosphotransferase system cellobiose-specific component IIA; Psort location: Cytoplasmic, score:9.97.
 
    0.833
chbG
Hypothetical protein; Involved in the degradation of chitin. ChbG is essential for growth on the acetylated chitooligosaccharides chitobiose and chitotriose but is dispensable for growth on cellobiose and chitosan dimer, the deacetylated form of chitobiose. Deacetylation of chitobiose-6-P and chitotriose-6-P is necessary for both the activation of the chb promoter by the regulatory protein ChbR and the hydrolysis of phosphorylated beta-glucosides by the phospho-beta-glucosidase ChbF. Catalyzes the removal of only one acetyl group from chitobiose-6-P to yield monoacetylchitobiose-6-P, t [...]
 
   
 0.829
CKO_01759
Hypothetical protein; KEGG: sec:SC1337 2.7e-232 celF; phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) K01222; COG: COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.754
CKO_01763
Hypothetical protein; KEGG: ece:Z2768 4.5e-49 celA; PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score:9.97.
 
   
 0.673
cobB
Hypothetical protein; KEGG: ssn:SSO_1140 2.5e-119 cobB; putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase K01463; COG: COG0846 NAD-dependent protein deacetylases, SIR2 family; Psort location: Cytoplasmic, score:8.96; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.662
CKO_03302
Hypothetical protein; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
  
  
 0.639
CKO_01981
Hypothetical protein; COG: COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.626
CKO_02877
Hypothetical protein; COG: COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.626
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.