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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01846Hypothetical protein. (678 aa)    
Predicted Functional Partners:
CKO_01867
Hypothetical protein; COG: NOG09073 non supervised orthologous group.
  
   0.753
CKO_02646
Hypothetical protein; KEGG: eci:UTI89_C0529 3.4e-99 tesA; acyl-CoA thioesterase I precursor K01048:K01076; COG: COG2755 Lysophospholipase L1 and related esterases; Psort location: Periplasmic, score:10.00.
  
 
 0.705
CKO_01694
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
  
 
 0.681
CKO_03254
Hypothetical protein; KEGG: cdi:DIP0942 0.0019 xseA; exodeoxyribonuclease VII large subunit K03601; COG: NOG06276 non supervised orthologous group.
  
 
 0.681
CKO_01847
Hypothetical protein.
       0.584
CKO_01848
Hypothetical protein; COG: NOG11915 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
    0.552
CKO_00292
Hypothetical protein; KEGG: ssn:SSO_1595 1.2e-220 6-phospho-beta-glucosidase K01223; COG: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Psort location: Cytoplasmic, score:9.26; Belongs to the glycosyl hydrolase 1 family.
   
   0.541
CKO_04071
Hypothetical protein; KEGG: eci:UTI89_C3078 2.8e-246 ascB; 6-phospho-beta-glucosidase K01223; COG: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
   
   0.541
CKO_04265
Hypothetical protein; KEGG: sec:SC2992 1.7e-262 bglA; 6-phospho-beta-glucosidase A K01223; COG: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Psort location: Cytoplasmic, score:9.97; Belongs to the glycosyl hydrolase 1 family.
   
   0.541
CKO_00725
Hypothetical protein; KEGG: ssn:SSO_2113 0. putative tyrosine-protein kinase; K00903 protein-tyrosine kinase K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score:9.82.
     
 0.461
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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