STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01917Hypothetical protein; COG: NOG11393 non supervised orthologous group. (362 aa)    
Predicted Functional Partners:
CKO_01916
Hypothetical protein; KEGG: sty:STY2073 9.8e-173 recE; exodeoxyribonuclease VIII K01146; COG: NOG06785 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_00018
Hypothetical protein; KEGG: bja:blr3367 3.7e-07 probable cellulase K01179; COG: NOG14136 non supervised orthologous group; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.711
CKO_01918
Hypothetical protein; COG: NOG30287 non supervised orthologous group.
       0.681
CKO_03999
Hypothetical protein; KEGG: stt:t2678 1.2e-215 tctE; putative two-component system sensor kinase K07649; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.674
CKO_03255
Hypothetical protein; COG: NOG09806 non supervised orthologous group.
  
     0.660
CKO_03128
Hypothetical protein; KEGG: eci:UTI89_C2514 1.2e-55 yfaL; hypothetical protein YfaL precursor K07279; COG: COG3468 Type V secretory pathway, adhesin AidA; Psort location: OuterMembrane, score:9.83.
  
     0.654
CKO_03254
Hypothetical protein; KEGG: cdi:DIP0942 0.0019 xseA; exodeoxyribonuclease VII large subunit K03601; COG: NOG06276 non supervised orthologous group.
  
     0.603
CKO_05134
Hypothetical protein; KEGG: reh:H16_A2683 2.9e-21 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K01529; COG: COG3933 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
     0.580
CKO_02607
Hypothetical protein; KEGG: dre:562769 1.9e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96.
  
     0.573
CKO_04002
Hypothetical protein; COG: NOG11450 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.573
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.