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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_01946Hypothetical protein; KEGG: eci:UTI89_C1237 3.3e-220 ndh; NADH dehydrogenase K03885; COG: COG1252 NADH dehydrogenase, FAD-containing subunit. (430 aa)    
Predicted Functional Partners:
CKO_01947
Hypothetical protein.
       0.671
CKO_04387
Hypothetical protein; KEGG: sfx:S3241 4.8e-77 hybD; hydrogenase-2 component K08567; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
    
 
 0.650
gpmA
Hypothetical protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
   0.626
CKO_01948
Hypothetical protein; COG: COG3150 Predicted esterase; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0227 family.
       0.583
CKO_04072
Hypothetical protein; KEGG: sec:SC2778 1.2e-64 hycI, hycE; protease involved in processing C-terminal end of HycE K08315; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
    
 
 0.557
CKO_04073
Hypothetical protein; KEGG: eci:UTI89_C3081 2.6e-60 hycH; formate hydrogenlyase maturation protein HycH; COG: NOG09848 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
    
 
 0.557
CKO_00518
Hypothetical protein; KEGG: stm:STM2318 0. nuoL; NADH dehydrogenase I chain L K00341; COG: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.521
nagZ
Hypothetical protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
       0.514
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
  
 0.488
CKO_01950
Hypothetical protein; KEGG: sec:SC1158 5.2e-80 ycfN; putative cytoplasmic protein K07251; COG: COG0510 Predicted choline kinase involved in LPS biosynthesis; Psort location: Cytoplasmic, score:8.96.
       0.476
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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