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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtHHypothetical protein; KEGG: gsu:GSU3029 0.00067 long-chain-fatty-acid--[acyl-carrier-protein] ligase / acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase K05939:K01909; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (402 aa)    
Predicted Functional Partners:
CKO_02479
Hypothetical protein; KEGG: psp:PSPPH_3782 8.6e-14 porin D; COG: NOG06287 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
     0.578
CKO_01998
Hypothetical protein; KEGG sec:SC2531 0.0026 pepB; putative aminopeptidase K07751.
       0.572
CKO_00597
Hypothetical protein; COG: NOG14216 non supervised orthologous group.
  
     0.523
CKO_01999
Hypothetical protein; KEGG: eci:UTI89_C1189 4.0e-89 grxB; glutaredoxin 2 K03675; COG: COG2999 Glutaredoxin 2.
       0.511
CKO_02000
Hypothetical protein; COG: NOG07875 non supervised orthologous group.
       0.511
CKO_01613
Hypothetical protein; COG: NOG06063 non supervised orthologous group.
  
     0.450
CKO_01288
Hypothetical protein; COG: COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
  
     0.434
CKO_02002
Hypothetical protein; COG: NOG13873 non supervised orthologous group.
 
     0.424
CKO_03701
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
     0.418
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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