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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02029Hypothetical protein; KEGG: ava:Ava_2028 1.1e-13 two component transcriptional regulator, LuxR family; COG: COG2771 DNA-binding HTH domain-containing proteins; Psort location: Cytoplasmic, score:9.26. (216 aa)    
Predicted Functional Partners:
CKO_02030
Hypothetical protein; COG: NOG09844 non supervised orthologous group.
 
  
 0.984
CKO_02031
Hypothetical protein; COG: NOG08684 non supervised orthologous group.
 
  
 0.976
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.956
csgG
Hypothetical protein; May be involved in the biogenesis of curli organelles. Belongs to the CsgG family.
 
  
 0.945
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
   
 
 0.868
CKO_00321
Hypothetical protein; KEGG: stt:t0379 4.2e-268 narQ; nitrate/nitrite sensor protein K07674; COG: COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; Psort location: CytoplasmicMembrane, score:9.97.
 
 
 0.774
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
  
 
 0.749
CKO_02622
Hypothetical protein; KEGG: fal:FRAAL1304 2.8e-24 putative protein-glutamate methylesterase; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
  
 0.738
CKO_02817
Hypothetical protein; KEGG: ece:Z0462 4.2e-236 putative sensor kinase; hexosephosphate transport K07675; COG: COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.725
CKO_00008
Hypothetical protein; KEGG: ava:Ava_C0116 2.7e-28 two component transcriptional regulator, LuxR family; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
   
 0.698
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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