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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02044COG: COG3755 Uncharacterized protein conserved in bacteria. (131 aa)    
Predicted Functional Partners:
CKO_02042
Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
  
 0.719
CKO_01505
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
     0.581
CKO_02607
Hypothetical protein; KEGG: dre:562769 1.9e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96.
  
     0.460
CKO_02593
Hypothetical protein; COG: COG1309 Transcriptional regulator.
  
     0.455
CKO_04236
COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: Periplasmic, score:9.44.
  
     0.426
CKO_01220
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.72.
  
     0.419
CKO_03496
Hypothetical protein; KEGG: fnu:FN0522 1.8e-10 exonuclease SBCC K03546; COG: COG0419 ATPase involved in DNA repair.
  
     0.417
CKO_03128
Hypothetical protein; KEGG: eci:UTI89_C2514 1.2e-55 yfaL; hypothetical protein YfaL precursor K07279; COG: COG3468 Type V secretory pathway, adhesin AidA; Psort location: OuterMembrane, score:9.83.
  
     0.411
CKO_02627
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.72.
  
     0.408
CKO_03497
Hypothetical protein; KEGG: fnu:FN0444 1.0e-05 phosphoadenosine phosphosulfate reductase K00390; COG: COG0175 3-phosphoadenosine 5-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; Psort location: Cytoplasmic, score:8.96.
  
     0.407
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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