STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02047Hypothetical protein; KEGG: mav:MAV_3849 3.8e-29 wrbA; NAD(P)H:quinone oxidoreductase, type IV K00355; COG: COG0655 Multimeric flavodoxin WrbA. (198 aa)    
Predicted Functional Partners:
CKO_02048
Hypothetical protein; COG: NOG13872 non supervised orthologous group.
  
    0.959
ubiE
Hypothetical protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
CKO_03618
Hypothetical protein; KEGG: eci:UTI89_C4820 1.4e-118 ytfG; hypothetical protein YtfG; COG: COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
    
  0.900
dps
Hypothetical protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction.
  
  
 0.851
CKO_02705
COG: COG3126 Uncharacterized protein conserved in bacteria.
   
  
 0.820
CKO_00687
Hypothetical protein; KEGG: eco:b2097 1.6e-181 fbaB, dhnA; fructose-bisphosphate aldolase class I K01623; COG: COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
   
    0.818
CKO_04500
Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
    0.817
CKO_04012
COG: COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.706
CKO_00524
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
    0.685
CKO_02016
Hypothetical protein; COG: NOG09842 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
    0.674
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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