STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02055COG: COG4393 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00. (459 aa)    
Predicted Functional Partners:
CKO_02056
COG: COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport.
  
 0.987
CKO_02057
Hypothetical protein; COG: COG0672 High-affinity Fe2+/Pb2+ permease; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.985
CKO_02053
Hypothetical protein; KEGG: pen:PSEEN3665 3.9e-12 efflux ABC transporter, ATP-binding/permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.976
CKO_02054
Hypothetical protein; KEGG: cch:Cag_0337 3.2e-16 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.976
CKO_02052
Hypothetical protein; KEGG: rru:Rru_A2804 1.8e-68 ABC transporter component K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
    0.955
CKO_02051
Hypothetical protein; KEGG: reh:H16_A0306 5.1e-09 bcp; peroxiredoxin K00435; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.923
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
    0.874
CKO_01981
Hypothetical protein; COG: COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.765
CKO_02877
Hypothetical protein; COG: COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.765
grcA
Hypothetical protein; Acts as a radical domain for damaged PFL and possibly other radical proteins.
   
   0.730
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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