close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02074Hypothetical protein; KEGG: rha:RHA1_ro08170 8.5e-16 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (256 aa)    
Predicted Functional Partners:
CKO_02075
Hypothetical protein; COG: COG4521 ABC-type taurine transport system, periplasmic component.
 
 
 0.997
CKO_02812
Hypothetical protein; COG: COG4521 ABC-type taurine transport system, periplasmic component.
 
 
 0.996
tauB
Hypothetical protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 0.995
CKO_02073
Hypothetical protein; KEGG: eca:ECA1530 5.7e-97 tauB, ssiB; putative taurine transport ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
     0.950
CKO_02809
Hypothetical protein; KEGG: ece:Z0467 2.7e-147 tauD; taurine dioxygenase, 2-oxoglutarate-dependent K03119; COG: COG2175 Probable taurine catabolism dioxygenase; Psort location: Cytoplasmic, score:8.96.
 
 
 0.950
CKO_02810
Hypothetical protein; KEGG: rha:RHA1_ro08170 4.1e-23 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 
0.908
CKO_02082
Hypothetical protein; KEGG: reh:H16_B2218 6.1e-93 ABC-type transporter, ATPase component: NitT family; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
 0.905
CKO_01292
Hypothetical protein; KEGG: azo:azo0944 4.0e-89 nasD; putative nitrate transport system, ATP-binding protein; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
 0.896
CKO_02125
Hypothetical protein; KEGG: mav:MAV_3808 0.00062 2'-hydroxybiphenyl-2-sulfinate desulfinase K05977; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
  
 0.860
ssuB
Hypothetical protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.852
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.