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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02077Hypothetical protein; KEGG: eca:ECA1531 1.3e-136 D-cysteine desulfhydrase K01505; COG: COG2515 1-aminocyclopropane-1-carboxylate deaminase; Psort location: Cytoplasmic, score:8.96. (337 aa)    
Predicted Functional Partners:
CKO_02139
Hypothetical protein; KEGG: ecj:JW0911 2.0e-204 aspC; aspartate aminotransferase, PLP-dependent K00813; COG: COG1448 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:9.26.
     
  0.900
CKO_02076
Hypothetical protein; KEGG: eca:ECA1532 4.9e-75 putative aspartate racemase K01779; COG: COG1794 Aspartate racemase; Psort location: Cytoplasmic, score:8.96.
 
     0.885
CKO_02075
Hypothetical protein; COG: COG4521 ABC-type taurine transport system, periplasmic component.
 
   
 0.737
CKO_02074
Hypothetical protein; KEGG: rha:RHA1_ro08170 8.5e-16 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.730
CKO_02073
Hypothetical protein; KEGG: eca:ECA1530 5.7e-97 tauB, ssiB; putative taurine transport ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
       0.720
CKO_02078
Hypothetical protein.
       0.556
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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