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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02096COG: COG0670 Integral membrane protein, interacts with FtsH; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the BI1 family. (219 aa)    
Predicted Functional Partners:
htpX
Hypothetical protein; KEGG: stm:STM1844 2.4e-146 htpX; heat shock protein, integral membrane protein K03799; COG: COG0501 Zn-dependent protease with chaperone function; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the peptidase M48B family.
  
  
 0.673
CKO_02097
Hypothetical protein; Part of a sulfur-relay system.
     
 0.630
CKO_02095
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.548
CKO_00473
Hypothetical protein; KEGG: cal:CaalfMp14 0.0017 NAD4; NADH dehydrogenase subunit 4 K03881; COG: COG1286 Uncharacterized membrane protein, required for colicin V production; Psort location: CytoplasmicMembrane, score:9.46.
  
    0.495
CKO_00145
Hypothetical protein; KEGG: stm:STM3936 4.6e-182 hemX; uroporphyrinogen III methylase K02496; COG: COG2959 Uncharacterized enzyme of heme biosynthesis.
  
     0.447
CKO_03188
COG: COG2825 Outer membrane protein; Psort location: OuterMembrane, score:9.92; Belongs to the skp family.
  
     0.405
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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