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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02102COG: COG3110 Uncharacterized protein conserved in bacteria; Belongs to the UPF0319 family. (220 aa)    
Predicted Functional Partners:
CKO_02030
Hypothetical protein; COG: NOG09844 non supervised orthologous group.
  
     0.765
CKO_02031
Hypothetical protein; COG: NOG08684 non supervised orthologous group.
  
   
 0.765
CKO_01123
Hypothetical protein; KEGG: psp:PSPPH_2956 8.3e-08 hydrolase, carbon-nitrogen family K01950; COG: COG0388 Predicted amidohydrolase.
  
   
 0.752
CKO_01936
Hypothetical protein; KEGG: eci:UTI89_C1243 2.7e-161 ycfT; hypothetical protein K00680; COG: COG4763 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.724
CKO_04386
Hypothetical protein; COG: NOG08099 non supervised orthologous group.
  
     0.714
CKO_03439
Hypothetical protein; COG: NOG12172 non supervised orthologous group.
  
     0.705
ycgR
Hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
     0.689
CKO_02574
Hypothetical protein; KEGG: spt:SPA0750 0.0057 wzc; putative tyrosine-protein kinase K00903; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:9.82.
  
     0.671
CKO_02026
Hypothetical protein; COG: NOG09843 non supervised orthologous group.
  
     0.665
CKO_03889
Hypothetical protein; COG: NOG06780 non supervised orthologous group.
  
     0.633
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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