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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02116COG: COG3009 Uncharacterized protein conserved in bacteria. (187 aa)    
Predicted Functional Partners:
CKO_02117
COG: COG3008 Paraquat-inducible protein B.
 
   
 0.957
CKO_02118
Hypothetical protein; KEGG: sak:SAK_0198 0.0042 glycosyl transferase family protein K02851; COG: COG2995 Uncharacterized paraquat-inducible protein A; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.952
CKO_02119
Hypothetical protein; KEGG: pen:PSEEN3732 5.5e-163 ABC transporter, ATP-binding protein; COG: COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Psort location: CytoplasmicMembrane, score:7.88.
       0.629
CKO_04894
COG: COG3776 Predicted membrane protein.
  
     0.614
rlmL
Hypothetical protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.613
CKO_04333
Hypothetical protein; COG: NOG06291 non supervised orthologous group.
  
     0.613
CKO_02000
Hypothetical protein; COG: NOG07875 non supervised orthologous group.
  
     0.607
CKO_01140
Hypothetical protein; COG: COG2995 Uncharacterized paraquat-inducible protein A; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.604
lpoA
Hypothetical protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.
  
     0.560
matP
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.544
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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