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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuBHypothetical protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (255 aa)    
Predicted Functional Partners:
CKO_02125
Hypothetical protein; KEGG: mav:MAV_3808 0.00062 2'-hydroxybiphenyl-2-sulfinate desulfinase K05977; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.998
CKO_02127
Hypothetical protein; KEGG: rha:RHA1_ro08170 2.5e-25 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.998
ssuD
Hypothetical protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.996
CKO_02124
Hypothetical protein; KEGG: eci:UTI89_C1009 2.9e-86 ycbP; FMN reductase K00299; COG: COG0431 Predicted flavoprotein; Psort location: Cytoplasmic, score:8.96.
 
 
 0.993
CKO_02810
Hypothetical protein; KEGG: rha:RHA1_ro08170 4.1e-23 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.883
CKO_02074
Hypothetical protein; KEGG: rha:RHA1_ro08170 8.5e-16 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.852
CKO_01291
Hypothetical protein; KEGG: rha:RHA1_ro08170 7.7e-22 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.827
CKO_01290
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 0.819
CKO_02083
Hypothetical protein; KEGG: lwe:lwe1444 2.4e-14 opuCB; glycine betaine/L-proline ABC transporter, permease protein; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.814
CKO_02075
Hypothetical protein; COG: COG4521 ABC-type taurine transport system, periplasmic component.
 
  
 0.799
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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