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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02133Hypothetical protein. (49 aa)    
Predicted Functional Partners:
CKO_02132
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_02131
Hypothetical protein; KEGG: gga:418096 1.1e-17 GNPTAB, LOC418096; N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits K08239; COG: NOG08826 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.768
CKO_02129
Hypothetical protein; KEGG: stm:STM1057 0. pepN; aminopeptidase N K01256; COG: COG0308 Aminopeptidase N; Psort location: Cytoplasmic, score:9.12.
       0.574
CKO_02130
Hypothetical protein; KEGG: sec:SC1010 1.9e-07 pepN; aminopeptidase N K01256; COG: COG0308 Aminopeptidase N.
       0.574
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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