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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02173Hypothetical protein; KEGG: reh:H16_A0619 1.9e-96 YcaC related amidohydrolase K00517; COG: COG1335 Amidases related to nicotinamidase. (208 aa)    
Predicted Functional Partners:
CKO_00430
Hypothetical protein; KEGG: hma:rrnAC3411 1.3e-12 metal dependent amidohydrolase superfamily protein K01443:K01427:K01465:K01486; COG: COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
   
 0.727
CKO_02016
Hypothetical protein; COG: NOG09842 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
    0.612
CKO_00524
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
   
    0.609
CKO_01749
Hypothetical protein; COG: NOG12163 non supervised orthologous group.
   
    0.560
CKO_02193
Hypothetical protein; KEGG: shn:Shewana3_3385 2.5e-32 hypoxanthine phosphoribosyltransferase K00760; COG: COG1741 Pirin-related protein; Belongs to the pirin family.
 
    0.540
nnrE
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
   
    0.507
CKO_02172
Hypothetical protein.
       0.479
CKO_00687
Hypothetical protein; KEGG: eco:b2097 1.6e-181 fbaB, dhnA; fructose-bisphosphate aldolase class I K01623; COG: COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
   
    0.475
CKO_00431
COG: COG4317 Uncharacterized protein conserved in bacteria.
 
    0.468
CKO_00531
Hypothetical protein; KEGG: ypk:y2981 5.4e-227 katE; catalase; hydroperoxidase HPII(III) K03781; COG: COG0753 Catalase; Psort location: Cytoplasmic, score:9.26; Belongs to the catalase family.
  
   0.454
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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