close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02229Hypothetical protein; KEGG: rme:Rmet_2422 0.0046 peptidase S1C, Do K04771; COG: COG3031 Type II secretory pathway, component PulC; Psort location: CytoplasmicMembrane, score:9.82. (257 aa)    
Predicted Functional Partners:
CKO_02228
Hypothetical protein; COG: COG1450 Type II secretory pathway, component PulD; Psort location: OuterMembrane, score:10.00.
 
 0.996
CKO_02223
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
  
 0.979
CKO_02222
Hypothetical protein; COG: COG4795 Type II secretory pathway, component PulJ.
  
 0.971
CKO_02224
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
  
 0.961
CKO_02225
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.914
CKO_02221
Hypothetical protein; COG: COG3156 Type II secretory pathway, component PulK.
 
  
 0.887
CKO_02227
Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.884
CKO_02220
Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.883
CKO_02226
Hypothetical protein; COG: COG1459 Type II secretory pathway, component PulF; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.828
CKO_02219
Hypothetical protein; COG: COG3149 Type II secretory pathway, component PulM.
     
 0.810
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.