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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKHypothetical protein; KEGG: ava:Ava_1836 6.4e-16 glutathione synthetase K01920; COG: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Psort location: Cytoplasmic, score:8.96. (314 aa)    
Predicted Functional Partners:
CKO_02254
Hypothetical protein; COG: NOG08676 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
  
 0.913
CKO_02256
Hypothetical protein; KEGG: stm:STM0874 3.8e-116 mdaA; oxygen-insensitive NADPH nitroreductase; COG: COG0778 Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.870
CKO_02257
Hypothetical protein; COG: NOG12161 non supervised orthologous group.
  
  
 0.812
CKO_02267
Hypothetical protein; KEGG: shn:Shewana3_1692 5.4e-07 Xaa-His dipeptidase K01270; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
   
    0.757
CKO_03453
Hypothetical protein; KEGG: shn:Shewana3_1692 0.00084 Xaa-His dipeptidase K01270; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
   
    0.757
CKO_04285
Hypothetical protein; KEGG: pca:Pcar_0215 0.0042 NADH dehydrogenase I, M subunit K00342; COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.580
CKO_02258
Hypothetical protein; KEGG: tcx:Tcr_0139 2.9e-08 glutaredoxin-like region K03386; COG: COG0695 Glutaredoxin and related proteins; Psort location: Cytoplasmic, score:8.96.
     
 0.573
zntB
Hypothetical protein; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
     0.461
gshB
Hypothetical protein; KEGG: eci:UTI89_C3336 1.9e-162 gshB; glutathione synthetase K01920; COG: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Psort location: Cytoplasmic, score:8.96.
 
   
 0.450
kefC
Hypothetical protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
  
  
 0.408
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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