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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02279Hypothetical protein; KEGG: shn:Shewana3_2650 1.1e-36 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: CytoplasmicMembrane, score:8.60. (512 aa)    
Predicted Functional Partners:
CKO_02277
Hypothetical protein; KEGG: rha:RHA1_ro09047 4.3e-06 ABC peptide transporter, permease component K02033; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.993
CKO_02278
Hypothetical protein; KEGG: rha:RHA1_ro09047 5.0e-43 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 0.993
CKO_02280
Hypothetical protein; KEGG: reh:H16_A2101 2.3e-219 dppD1; ABC-type transporter, duplicated ATPase domains:PepT family; COG: COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Psort location: CytoplasmicMembrane, score:9.59.
 
 
 0.991
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
    0.879
CKO_01522
Hypothetical protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.812
CKO_01523
Hypothetical protein; KEGG: rha:RHA1_ro09047 1.3e-42 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.802
CKO_04992
Hypothetical protein; KEGG: bpm:BURPS1710b_A0449 5.3e-05 glycine betaine/L-proline ABC transporter, permease protein K02001; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.797
CKO_04993
Hypothetical protein; KEGG: rha:RHA1_ro09047 1.5e-48 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.765
CKO_04928
Hypothetical protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.764
CKO_02281
Hypothetical protein; KEGG: stm:STM0847 5.5e-147 ybiK; putative asparaginase K01424; COG: COG1446 Asparaginase; Psort location: Periplasmic, score:9.44.
 
  
 0.761
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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