STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02296Hypothetical protein; KEGG: dre:30298 0.0043 jak2b; Janus kinase 2b K04447; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (433 aa)    
Predicted Functional Partners:
CKO_02297
Hypothetical protein; KEGG: ssn:SSO_0800 0. putative glucosidase K01187; COG: COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
 
     0.790
CKO_04496
Hypothetical protein; KEGG: eci:UTI89_C1658 7.7e-06 ydcR; hypothetical protein YdcR K00811; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
   
 0.529
CKO_02295
Hypothetical protein; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
 
     0.503
rhaT
Hypothetical protein; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.
  
    0.477
CKO_04218
Hypothetical protein; KEGG: nph:NP3568A 7.0e-05 homolog 3 to mannose-1-phosphate guanylyltransferase (GDP) K00971; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; Psort location: Cytoplasmic, score:8.96.
 
     0.426
CKO_01081
Hypothetical protein; KEGG: eci:UTI89_C4210 2.0e-19 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.405
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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