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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02303Hypothetical protein; KEGG: eci:UTI89_C0819 3.0e-249 ybiP; hypothetical protein YbiP K00924; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score:9.46. (528 aa)    
Predicted Functional Partners:
CKO_02302
Hypothetical protein.
       0.773
CKO_00056
Hypothetical protein; KEGG: sty:STY4228 0.00075 4'-phosphopantetheinyl transferase K06133; COG: COG2091 Phosphopantetheinyl transferase.
  
     0.733
CKO_01651
Hypothetical protein; COG: COG3895 Predicted periplasmic protein.
  
     0.654
CKO_00758
Hypothetical protein; KEGG: aci:ACIAD0068 4.3e-05 ptk; tyrosine-protein kinase, autophosphorylates K00903; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.644
CKO_01617
Hypothetical protein; COG: COG3136 Uncharacterized membrane protein required for alginate biosynthesis; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.631
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.622
malT
Hypothetical protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box.
  
     0.614
CKO_01080
Hypothetical protein; COG: NOG12148 non supervised orthologous group.
  
     0.612
CKO_01489
COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.612
CKO_00277
Hypothetical protein; KEGG: aha:AHA_1764 2.7e-12 ubiquitin ligase sinat5 K01932; COG: NOG17950 non supervised orthologous group.
  
     0.608
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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