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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02332COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60. (331 aa)    
Predicted Functional Partners:
CKO_02333
Hypothetical protein; KEGG: rru:Rru_A1792 1.0e-168 ABC transporter component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
 
  
 0.976
CKO_02334
Hypothetical protein; KEGG: fal:FRAAL1796 2.0e-10 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.960
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.916
CKO_02335
Hypothetical protein; KEGG: fal:FRAAL1796 3.0e-11 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.915
CKO_02331
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
 
  
 0.892
CKO_04934
Hypothetical protein; KEGG: fal:FRAAL1796 1.2e-10 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.697
CKO_04427
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
  
 
 0.666
CKO_01443
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.661
CKO_02835
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.650
CKO_00657
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.639
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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