STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02335Hypothetical protein; KEGG: fal:FRAAL1796 3.0e-11 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (368 aa)    
Predicted Functional Partners:
CKO_02333
Hypothetical protein; KEGG: rru:Rru_A1792 1.0e-168 ABC transporter component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
 0.948
CKO_02332
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60.
 
  
 0.915
CKO_02334
Hypothetical protein; KEGG: fal:FRAAL1796 2.0e-10 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
0.808
CKO_04936
Hypothetical protein; KEGG: eci:UTI89_C0735 1.0e-06 tolA; membrane spanning protein TolA K03646; COG: COG0845 Membrane-fusion protein.
 
  
 0.729
CKO_02331
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
 
  
 0.690
CKO_04935
Hypothetical protein; KEGG: rru:Rru_A1792 3.8e-84 ABC transporter component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
0.647
CKO_04934
Hypothetical protein; KEGG: fal:FRAAL1796 1.2e-10 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 
0.579
CKO_02166
Hypothetical protein; COG: COG1944 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
  
 0.537
CKO_01792
Hypothetical protein; KEGG: sbo:SBO_1322 1.5e-87 ydjA; hypothetical protein; COG: COG0778 Nitroreductase.
  
  
 0.493
CKO_02256
Hypothetical protein; KEGG: stm:STM0874 3.8e-116 mdaA; oxygen-insensitive NADPH nitroreductase; COG: COG0778 Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.493
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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