Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CKO_02358Hypothetical protein; KEGG: reh:H16_A3019 8.3e-57 hutC; histidine utilization repressor; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96. (239 aa)    
Predicted Functional Partners:
hutI
Hypothetical protein; KEGG: sec:SC0785 5.2e-174 hutI; imidazolonepropionase K01468; COG: COG1228 Imidazolonepropionase and related amidohydrolases.
 
  
 0.944
hutU
Hypothetical protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.934
hutH
Hypothetical protein; KEGG: spt:SPA1961 6.2e-242 hutH; histidine ammonia-lyase K01745; COG: COG2986 Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.901
ves
COG: COG3758 Uncharacterized protein conserved in bacteria; Belongs to the Ves family.
  
  
 0.892
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
   
  
 0.844
hutG
Hypothetical protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
  
 0.823
CKO_02926
Hypothetical protein; KEGG: pol:Bpro_1157 2.6e-94 histidine ammonia-lyase K01745; COG: COG2986 Histidine ammonia-lyase.
 
  
 0.683
CKO_03768
Hypothetical protein; KEGG: reh:H16_B1289 2.1e-19 phnF; regulator of phosphonate operon, GntR-family; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
   
 0.609
CKO_01760
Hypothetical protein; KEGG: bce:BC3740 2.6e-07 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.577
CKO_03095
Hypothetical protein; KEGG: bcz:BCZK3497 1.9e-09 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
  
 0.577
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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