STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02385Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. (722 aa)    
Predicted Functional Partners:
CKO_02566
Hypothetical protein; KEGG: spt:SPA2137 1.4e-143 entB; isochorismatase K01252; COG: COG3433 Aryl carrier domain; Psort location: Cytoplasmic, score:8.96.
   
  
 0.882
CKO_02384
Hypothetical protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.839
CKO_02382
Hypothetical protein; KEGG: stm:STM0771 1.2e-105 putative ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12.
 
  
 0.808
CKO_02383
Hypothetical protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.801
CKO_03832
Hypothetical protein; COG: COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.799
CKO_00835
Hypothetical protein; KEGG: shn:Shewana3_2312 0.0015 1-(5-phosphoribosyl)-5- K01814; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
  
 0.770
CKO_02575
Hypothetical protein; KEGG: stm:STM0588 0. entF; enterobactin synthetase, component F (nonribosomal peptide synthetase) K02364; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases; Psort location: CytoplasmicMembrane, score:8.46.
   
  
 0.697
CKO_00040
COG: COG0810 Periplasmic protein TonB, links inner and outer membranes; Psort location: CytoplasmicMembrane, score:8.02.
 
 
 0.553
CKO_02567
Hypothetical protein; KEGG: eci:UTI89_C0596 6.5e-263 entE; enterobactin synthetase component E K02363; COG: COG1021 Peptide arylation enzymes; Psort location: Cytoplasmic, score:9.97.
   
  
 0.539
CKO_02386
Hypothetical protein; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.454
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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