STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02406COG: COG3790 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46. (97 aa)    
Predicted Functional Partners:
CKO_02409
Hypothetical protein; KEGG: spt:SPA2002 3.1e-201 cydB; cytochrome d ubiquinol oxidase subunit II K00426; COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.856
CKO_02410
Hypothetical protein; KEGG: stm:STM0740 2.8e-269 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425; COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.835
CKO_01228
Hypothetical protein; KEGG: ppu:PP_4650 1.5e-130 cioB; ubiquinol oxidase subunit II, cyanide insensitive K00426; COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.793
CKO_01227
Hypothetical protein; KEGG: sec:SC0401 1.5e-201 cydA; cytochrome BD2 subunit I K00425; COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.786
CKO_02402
Hypothetical protein; KEGG: eci:UTI89_C0735 1.0e-83 tolA; membrane spanning protein TolA K03646; COG: COG3064 Membrane protein involved in colicin uptake; Psort location: CytoplasmicMembrane, score:8.02.
 
     0.775
CKO_01087
COG: COG3102 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
     0.770
CKO_00501
Hypothetical protein; COG: COG3013 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0304 family.
  
     0.767
CKO_03401
Hypothetical protein; KEGG: ece:Z5988 8.8e-101 putative lipoate-protein ligase A K03800:K07186; COG: COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.766
wzzE
Hypothetical protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.764
CKO_03626
Hypothetical protein; KEGG: pen:PSEEN0463 0.00012 peptidase, M23/M37 family K01423; COG: COG3061 Cell envelope opacity-associated protein A.
  
     0.762
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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