Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02409Hypothetical protein; KEGG: spt:SPA2002 3.1e-201 cydB; cytochrome d ubiquinol oxidase subunit II K00426; COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2; Psort location: CytoplasmicMembrane, score:10.00. (379 aa)    
Predicted Functional Partners:
CKO_01227
Hypothetical protein; KEGG: sec:SC0401 1.5e-201 cydA; cytochrome BD2 subunit I K00425; COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1; Psort location: CytoplasmicMembrane, score:10.00.
 0.999
CKO_02410
Hypothetical protein; KEGG: stm:STM0740 2.8e-269 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425; COG: COG1271 Cytochrome bd-type quinol oxidase, subunit 1; Psort location: CytoplasmicMembrane, score:10.00.
 0.999
CKO_02408
Hypothetical protein; COG: COG4890 Predicted outer membrane lipoprotein.
  
 0.988
CKO_02185
Hypothetical protein; KEGG: cch:Cag_0716 7.5e-72 ATPase K06148; COG: COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.968
CKO_02186
Hypothetical protein; KEGG: cch:Cag_0717 2.6e-85 ATPase K06148; COG: COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.943
CKO_01228
Hypothetical protein; KEGG: ppu:PP_4650 1.5e-130 cioB; ubiquinol oxidase subunit II, cyanide insensitive K00426; COG: COG1294 Cytochrome bd-type quinol oxidase, subunit 2; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 
0.922
CKO_02406
COG: COG3790 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
    0.856
CKO_02732
Hypothetical protein; KEGG: eci:UTI89_C0452 7.9e-52 cyoD; cytochrome o ubiquinol oxidase protein CyoD K02300; COG: COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.632
CKO_02411
Hypothetical protein.
       0.531
CKO_02042
Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
      
 0.485
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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