STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02413Hypothetical protein; KEGG: lmf:LMOf2365_0421 3.1e-144 glycosyl hydrolase, family 38 K01191; COG: COG0383 Alpha-mannosidase. (865 aa)    
Predicted Functional Partners:
CKO_02414
Hypothetical protein; KEGG: eco:b0731 3.2e-293 hrsA; PTS family enzyme IIA (N-terminal); enzyme IIBC (C-terminal), induction of OmpC K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.837
CKO_04131
Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.648
CKO_02415
Hypothetical protein; KEGG: btk:BT9727_3183 4.3e-21 transcriptional regulator, GntR family; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
     0.645
CKO_03606
Hypothetical protein; KEGG: eci:UTI89_C0121 8.8e-53 usp; uropathogenic specific protein K01150; COG: COG3157 Hemolysin-coregulated protein (uncharacterized).
  
     0.575
CKO_04128
Hypothetical protein; KEGG: eci:UTI89_C3136 4.2e-252 hypothetical protein K00803; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score:8.96.
  
    0.544
CKO_04521
Hypothetical protein; KEGG: sfx:S3376 1.1e-171 yhaD; glycerate kinase K00865; COG: COG1929 Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
  0.526
CKO_04862
Hypothetical protein; KEGG: eci:UTI89_C0121 8.1e-59 usp; uropathogenic specific protein K01150; COG: COG3157 Hemolysin-coregulated protein (uncharacterized).
  
     0.518
CKO_04070
Hypothetical protein; KEGG: ecj:JW5435 1.0e-232 ascF; fused cellobiose/arbutin/salicin-specific enzyme IIBC component of PTS K02752:K02753; COG: COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.499
CKO_03579
Hypothetical protein; KEGG: vvy:VVA1392 3.8e-36 PTS fructose-specific enzyme IIA component homolog K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.26.
 
    0.495
CKO_04126
Hypothetical protein; COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score:8.96.
  
     0.475
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.