Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CKO_02419Hypothetical protein; KEGG: ece:Z0892 4.3e-211 putative methylaspartate ammonia-lyase K04835; COG: COG3799 Methylaspartate ammonia-lyase; Psort location: Cytoplasmic, score:8.96. (413 aa)    
Predicted Functional Partners:
glmE
Hypothetical protein; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
 0.996
glmS-2
Hypothetical protein; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
  
  0.994
CKO_02420
Hypothetical protein; COG: NOG07992 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.957
CKO_02421
Hypothetical protein; COG: NOG19635 non supervised orthologous group.
 
     0.950
CKO_02417
Hypothetical protein; KEGG: fnu:FN1854 7.2e-58 methylaspartate mutase K01846; COG: NOG07779 non supervised orthologous group.
 
     0.944
CKO_02543
Hypothetical protein; KEGG: stm:STM0622 8.9e-140 citE; citrate lyase beta chain (acyl lyase subunit) K01660:K01644; COG: COG2301 Citrate lyase beta subunit; Psort location: Cytoplasmic, score:9.97; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.461
citD
Hypothetical protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.445
CKO_02544
Hypothetical protein; KEGG: stm:STM0621 5.9e-246 citF; bifunctional citrate lyase alpha chain/citrate-ACP transferase K01037:K01643; COG: COG3051 Citrate lyase, alpha subunit; Psort location: Cytoplasmic, score:9.97.
 
     0.430
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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