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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02440Hypothetical protein; KEGG: eci:UTI89_C0121 7.2e-209 usp; uropathogenic specific protein K01150; COG: COG5529 Pyocin large subunit. (580 aa)    
Predicted Functional Partners:
CKO_02441
Hypothetical protein; COG: NOG17103 non supervised orthologous group.
       0.773
CKO_02442
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_04357
Hypothetical protein; COG: COG3157 Hemolysin-coregulated protein (uncharacterized); Psort location: Cytoplasmic, score:8.96.
  
     0.750
CKO_02443
Hypothetical protein; COG: NOG17103 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.588
CKO_02444
Hypothetical protein; COG: NOG26283 non supervised orthologous group.
       0.588
CKO_00362
COG: COG3203 Outer membrane protein (porin); Psort location: OuterMembrane, score:10.00.
  
     0.584
CKO_03512
Hypothetical protein; KEGG: syg:sync_2368 0.0053 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score:8.96.
  
     0.548
betI
Hypothetical protein; Repressor involved in choline regulation of the bet genes.
  
     0.539
CKO_03511
Hypothetical protein; COG: COG0535 Predicted Fe-S oxidoreductases.
  
     0.493
CKO_03707
Hypothetical protein; KEGG: lpl:lp_3093 0.0072 muramidase (putative) K01185; COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:10.00.
  
     0.456
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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