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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02445Hypothetical protein; COG: COG3180 Putative ammonia monooxygenase; Psort location: CytoplasmicMembrane, score:10.00. (349 aa)    
Predicted Functional Partners:
CKO_02049
Hypothetical protein; KEGG: ecp:ECP_1001 2.2e-200 glucose-1-phosphatase precursor K01085; COG: NOG06770 non supervised orthologous group; Psort location: Periplasmic, score:10.00.
  
     0.622
CKO_01657
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.550
CKO_04002
Hypothetical protein; COG: NOG11450 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
    0.532
CKO_02443
Hypothetical protein; COG: NOG17103 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.434
CKO_02444
Hypothetical protein; COG: NOG26283 non supervised orthologous group.
       0.434
CKO_04415
Hypothetical protein; KEGG: stm:STM3178 3.2e-199 ygiY; putative sensory histidine kinase in regulatory system K07645; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.97.
  
     0.432
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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