close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02450Hypothetical protein; KEGG: bcz:BCZK3497 1.9e-13 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26. (282 aa)    
Predicted Functional Partners:
CKO_00418
Hypothetical protein; KEGG: bli:BL05281 1.6e-08 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
  
     0.753
CKO_03040
Hypothetical protein; KEGG: bli:BL05281 2.5e-11 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
  
     0.704
CKO_03619
Hypothetical protein; KEGG: bce:BC3740 3.1e-11 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.96.
  
     0.704
CKO_03318
Hypothetical protein; KEGG: bcz:BCZK2914 7.1e-07 adaA; methylphosphotriester-DNA alkyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
     0.636
CKO_00912
Hypothetical protein; KEGG: bur:Bcep18194_C7173 1.1e-06 two component transcriptional regulator, AraC family; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.96.
  
     0.552
CKO_01249
Hypothetical protein; KEGG: bur:Bcep18194_C7173 1.1e-06 two component transcriptional regulator, AraC family; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.96.
  
     0.552
CKO_02449
COG: COG4289 Uncharacterized protein conserved in bacteria.
       0.509
CKO_00027
Hypothetical protein; KEGG: bha:BH0394 1.2e-07 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.506
CKO_02448
Hypothetical protein; KEGG: eci:UTI89_C3355 1.2e-06 nupG; transport of nucleosides, permease protein K03289; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
       0.470
CKO_01760
Hypothetical protein; KEGG: bce:BC3740 2.6e-07 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.461
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.