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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02461Hypothetical protein; COG: NOG13868 non supervised orthologous group. (101 aa)    
Predicted Functional Partners:
CKO_02957
Hypothetical protein; KEGG: aha:AHA_3423 2.9e-77 esterase YafA; COG: COG1073 Hydrolases of the alpha/beta superfamily; Belongs to the UPF0255 family.
  
     0.763
CKO_00501
Hypothetical protein; COG: COG3013 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0304 family.
  
     0.757
CKO_02000
Hypothetical protein; COG: NOG07875 non supervised orthologous group.
  
     0.749
wzzE
Hypothetical protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.746
CKO_03028
Hypothetical protein; COG: NOG10261 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.742
CKO_01350
Hypothetical protein; COG: NOG13548 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.737
CKO_01948
Hypothetical protein; COG: COG3150 Predicted esterase; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0227 family.
  
     0.735
CKO_00447
COG: COG3691 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
    0.679
CKO_00355
Hypothetical protein; COG: NOG06776 non supervised orthologous group.
  
     0.678
CKO_02002
Hypothetical protein; COG: NOG13873 non supervised orthologous group.
  
     0.677
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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