STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02473Hypothetical protein; KEGG: ecc:c0773 3.8e-123 ybfF; putative esterase/lipase YbfF; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (257 aa)    
Predicted Functional Partners:
CKO_00864
Hypothetical protein; KEGG: ecp:ECP_1975 1.9e-199 putative acyl-CoA dehydrogenase K00257; COG: COG1960 Acyl-CoA dehydrogenases; Psort location: Cytoplasmic, score:8.96.
   
 0.732
CKO_02965
Hypothetical protein; KEGG: eco:b0221 0. fadE, fadF, yafH; medium-long-chain fatty acyl-CoA dehydrogenase K06445; COG: COG1960 Acyl-CoA dehydrogenases; Psort location: CytoplasmicMembrane, score:9.93.
   
 0.732
caiA
Hypothetical protein; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA; Belongs to the acyl-CoA dehydrogenase family.
   
 0.732
CKO_03651
Hypothetical protein; KEGG: eci:UTI89_C4787 1.5e-265 aidB; putative acyl-CoA dehydrogenase; COG: COG1960 Acyl-CoA dehydrogenases.
   
 0.732
apaH
Hypothetical protein; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.704
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.683
seqA
Hypothetical protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
       0.616
CKO_03720
Hypothetical protein; KEGG: vvy:VV2243 2.9e-148 adenylosuccinate lyase K01857; COG: COG0015 Adenylosuccinate lyase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.606
CKO_02474
Hypothetical protein; COG: NOG13544 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.591
CKO_02471
Hypothetical protein; KEGG: eco:b0688 8.8e-291 pgm, blu; phosphoglucomutase K01835; COG: COG0033 Phosphoglucomutase.
   
   0.589
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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