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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipBHypothetical protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (222 aa)    
Predicted Functional Partners:
lipA
Hypothetical protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
 0.998
lplA
Hypothetical protein; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes.
   
 0.935
gcvH
Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.924
CKO_00462
Hypothetical protein; KEGG: ssn:SSO_2381 1.2e-206 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647; COG: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Psort location: Cytoplasmic, score:9.97; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.811
CKO_01963
Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
    
 0.811
CKO_04921
Hypothetical protein; KEGG: vfi:VF0857 5.6e-99 3-oxoacyl-(acyl carrier protein) synthase K00646; COG: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Psort location: Cytoplasmic, score:9.97; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.811
CKO_04924
Hypothetical protein; KEGG: ecc:c1186 1.9e-208 putative beta-ketoacyl-ACP synthase K00647; COG: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Psort location: Cytoplasmic, score:9.97; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.811
CKO_02527
Hypothetical protein; KEGG: dme:Dmel_CG10495 0.0086 CG10495 K05545; COG: COG2921 Uncharacterized conserved protein; Belongs to the UPF0250 family.
  
  
 0.804
CKO_01375
Hypothetical protein; KEGG: sty:STY1352 1.0e-131 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208; COG: COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); Psort location: Cytoplasmic, score:9.26.
     
  0.800
CKO_03258
Hypothetical protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 
 0.637
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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