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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02537Hypothetical protein; COG: COG3069 C4-dicarboxylate transporter; Psort location: CytoplasmicMembrane, score:10.00. (461 aa)    
Predicted Functional Partners:
CKO_03435
Hypothetical protein; COG: COG2966 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.731
CKO_03436
Hypothetical protein; COG: COG3610 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.677
CKO_02033
Hypothetical protein; COG: NOG09737 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.656
CKO_04263
COG: COG3097 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0267 family.
  
     0.632
CKO_04973
Hypothetical protein; KEGG: eci:UTI89_C4062 0. yhjL; cellulose synthase operon protein C K00694; COG: COG0457 FOG: TPR repeat; Psort location: OuterMembrane, score:9.52.
  
     0.597
CKO_03748
Hypothetical protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
   
 0.535
CKO_02536
Hypothetical protein.
       0.533
CKO_04974
Hypothetical protein; KEGG: spt:SPA3473 1.3e-177 yhjM; probable endoglucanase precursor K01179; COG: COG3405 Endoglucanase Y; Psort location: Extracellular, score:9.72; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
     0.528
CKO_03697
Hypothetical protein; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
   
 0.523
CKO_00501
Hypothetical protein; COG: COG3013 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0304 family.
  
     0.498
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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