close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02539Hypothetical protein; KEGG: btk:BT9727_0488 4.1e-23 response regulator K07703; COG: COG4565 Response regulator of citrate/malate metabolism. (225 aa)    
Predicted Functional Partners:
CKO_02540
Hypothetical protein; KEGG: stt:t2242 3.2e-270 dpiB; sensor kinase DpiB K07700; COG: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; Psort location: CytoplasmicMembrane, score:7.88.
 
 0.997
CKO_03361
Hypothetical protein; KEGG: eca:ECA2577 1.1e-164 citA; two-component sensor kinase K07700; COG: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; Psort location: CytoplasmicMembrane, score:9.99.
 
  
  0.976
CKO_03362
Hypothetical protein; KEGG: btl:BALH_0517 1.4e-20 response regulator; COG: COG4565 Response regulator of citrate/malate metabolism; Psort location: Cytoplasmic, score:8.96.
  
  
 
0.911
CKO_03745
Hypothetical protein; KEGG: sdy:SDY_4238 2.6e-243 yjdH; putative 2-component sensor protein K07701; COG: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.894
CKO_02538
Hypothetical protein.
       0.773
CKO_02541
Hypothetical protein; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
   
 0.467
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
     
 0.463
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
     
 0.462
citD
Hypothetical protein; Covalent carrier of the coenzyme of citrate lyase.
 
   
 0.420
CKO_03359
Hypothetical protein; Uptake of citrate across the boundary membrane with the concomitant uptake of a sodium ion (symport system). Belongs to the sodium:citrate (SCF) symporter family.
 
    0.420
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.