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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02555Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (248 aa)    
Predicted Functional Partners:
dsbD
Hypothetical protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.
  
 
 0.798
CKO_02062
Hypothetical protein; KEGG: xcc:XCC0519 6.7e-56 dsbD; c-type cytochrome biogenesis protein K04084; COG: COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.783
dsbB
Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
  
 
 0.746
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.598
CKO_02026
Hypothetical protein; COG: NOG09843 non supervised orthologous group.
  
     0.593
CKO_00411
Hypothetical protein; KEGG: cpr:CPR_1400 4.3e-09 chloride channel protein K01529; COG: COG0038 Chloride channel protein EriC; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.575
CKO_03434
Hypothetical protein; COG: NOG09075 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
    0.562
CKO_02362
Hypothetical protein; KEGG: stm:STM0786 7.0e-211 ybhC; putative pectinesterase K01051; COG: COG4677 Pectin methylesterase.
  
     0.527
CKO_02556
Hypothetical protein; KEGG: shn:Shewana3_3435 9.4e-05 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
       0.515
glaH
Hypothetical protein; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.
  
     0.508
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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