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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02557Hypothetical protein; KEGG: eci:UTI89_C2238 1.5e-146 ibrA; hypothetical protein YbdN K00390; COG: COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase. (411 aa)    
Predicted Functional Partners:
CKO_02558
Hypothetical protein; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
 
 0.994
CKO_03478
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
 
 0.657
CKO_04346
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
 
 0.656
CKO_00411
Hypothetical protein; KEGG: cpr:CPR_1400 4.3e-09 chloride channel protein K01529; COG: COG0038 Chloride channel protein EriC; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.618
CKO_02628
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:10.00.
  
     0.597
CKO_03238
Hypothetical protein; KEGG: sty:STY0196 1.5e-64 yadI; putative PTS system IIA component K02821; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
  
     0.585
CKO_02556
Hypothetical protein; KEGG: shn:Shewana3_3435 9.4e-05 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
 
  
 0.580
CKO_03845
Hypothetical protein; KEGG: ecc:c5045 4.2e-117 aphA; class B acid phosphatase precursor K03788; COG: COG3700 Acid phosphatase (class B); Belongs to the class B bacterial acid phosphatase family.
  
     0.568
CKO_01041
Hypothetical protein; COG: NOG14112 non supervised orthologous group.
  
     0.561
CKO_02623
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.72.
  
     0.558
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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