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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02574Hypothetical protein; KEGG: spt:SPA0750 0.0057 wzc; putative tyrosine-protein kinase K00903; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:9.82. (391 aa)    
Predicted Functional Partners:
CKO_01123
Hypothetical protein; KEGG: psp:PSPPH_2956 8.3e-08 hydrolase, carbon-nitrogen family K01950; COG: COG0388 Predicted amidohydrolase.
  
     0.771
CKO_04610
Hypothetical protein; KEGG: ava:Ava_0219 0.0082 serine/threonine protein kinase K00908; COG: NOG06212 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.738
CKO_00349
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
  
     0.727
wecC
Hypothetical protein; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.
  
  
 0.717
CKO_04896
Hypothetical protein; COG: NOG09778 non supervised orthologous group.
 
     0.691
CKO_00232
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
  
     0.686
CKO_01694
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
  
     0.686
CKO_04191
Hypothetical protein; COG: COG4795 Type II secretory pathway, component PulJ; Psort location: Cytoplasmic, score:8.96.
  
     0.680
CKO_02102
COG: COG3110 Uncharacterized protein conserved in bacteria; Belongs to the UPF0319 family.
  
     0.671
CKO_01695
Hypothetical protein; KEGG: mag:amb2674 1.7e-08 cytochrome b subunit of formate dehydrogenase K00127; COG: COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); Psort location: CytoplasmicMembrane, score:10.00.
  
     0.664
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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