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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02604Hypothetical protein. (59 aa)    
Predicted Functional Partners:
CKO_02603
Hypothetical protein; KEGG: eci:UTI89_C3355 3.4e-51 nupG; transport of nucleosides, permease protein K03289; COG: NOG06278 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.561
CKO_02601
Hypothetical protein; KEGG: bme:BMEI1388 8.0e-36 oxidoreductase K00100; COG: COG0673 Predicted dehydrogenases and related proteins.
       0.540
CKO_02602
Hypothetical protein; KEGG: hma:rrnAC0265 2.6e-07 apl; AP-endonuclease/AP-lyase K01151:K01741; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score:8.96.
       0.540
CKO_02600
Hypothetical protein; KEGG: efa:EF1922 1.4e-13 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
       0.405
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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