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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02612COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (432 aa)    
Predicted Functional Partners:
CKO_02611
Hypothetical protein; KEGG: eci:UTI89_C2351 1.8e-59 yegO; hypothetical protein YegO K07789; COG: COG3696 Putative silver efflux pump; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.999
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.965
CKO_02613
Hypothetical protein; COG: COG5569 Uncharacterized conserved protein.
 
 
 0.934
CKO_02614
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.926
CKO_02616
Hypothetical protein; Member of a two-component regulatory system.
 
  
 0.828
CKO_02835
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 
 0.822
CKO_01443
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
  
 
 0.797
CKO_04427
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
  
 
 0.711
CKO_02615
Hypothetical protein; KEGG: rha:RHA1_ro05622 8.1e-43 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
  
 0.676
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
   
   0.671
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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