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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02649Hypothetical protein; COG: COG0390 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (259 aa)    
Predicted Functional Partners:
CKO_02650
Hypothetical protein; KEGG: lpn:lpg1141 1.6e-28 spermidine/putrescine ABC transporter, ATP-binding protein PotA K02052; COG: COG4619 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
  
 0.980
CKO_02652
COG: COG1585 Membrane protein implicated in regulation of membrane protease activity; Psort location: CytoplasmicMembrane, score:9.46.
     
 0.583
CKO_02651
Hypothetical protein; KEGG: reh:H16_A2036 1.7e-58 membrane protease subunits, stomatin/prohibitin homologs K01423; COG: COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
       0.524
CKO_01599
Hypothetical protein; COG: COG1266 Predicted metal-dependent membrane protease; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.459
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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